AFB Mycobacterium tuberculosis Complex Genotyping (TBGEN)  

 
NPHL has moved to an electronic ordering system, NUlirt, and it is now the preferred method to order all tests. Once ordered, print a "batch list" (see NUlirt Guide).

Forms Required - Nulirt batch list or NPHL Test Request Form (completed in entirety) must accompany the specimen to include the following information: symptoms and date of onset, pregnancy status, travel and vaccine history. Testing will not be performed without all required information.

Please call NPHL Client Services at (402) 559-2440 or toll free at (800) 334-0459 for further clarification.

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Test: Mycobacterium tuberculosis Complex Genotyping  
Synonym:
  • MTB genotyping
  • TB
  • Mycobacterium tuberculosis
  • MTBC
  • Spoligotyping
 
Method: Whole genome sequencing  
Availability: Monday - Friday  
Specimen: Pure isolate in liquid (MGIT) or solid media (Lowenstein-Jensen or Middlebrook)  
Collection Device:
  • Isolate on media slant or plate
  • Seal with Parafilm™ or tape
  • Test subject to CLIA regulations and requires 2 patient identifiers on container and requisition forms
 
Volume: Submitting laboratory should keep 1 mL of MGIT and send the remaining or a subculture on solid media  
Storage/Transport:
  • For shipping of isolates, see Category A instructions
  • Specimen Packaging & Shipping - NPHL
  • NUlirt packing list or appropriate paperwork (completed in entirety) must accompany specimens
  • Seal tubes with Parafilm™ or tape and place in biohazard bag with absorbant material
 
Unacceptable: Mixed isolates, clinical specimens (ie. sputum, BAL)  
Specimen Stability: Stable at ambient air 15°-25° C  
Reference Interval:  
Reportable Disease:  
Comments: Test performed at Michigan Department of Community Health, TB laboratory, Lansing, MI 48906  
Revised: 3/5/2024 
If you have questions about proper specimen collection, please call NPHL Client Services at (402) 559-2440 or toll free at (800) 334-0459.

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